update_tidymicrobiome — update_tidymicrobiome • tidymicrobiome

Update packages in tidymicrobiome.

update_tidymicrobiome(
  packages = c("core", "all"),
  from = c("gitlab", "github", "tidymicrobiome.org"),
  fastgit = FALSE
)

Arguments

packages: core or all packages in tidymicrobiome. "core" means all the core packages in tidymicrobiome and "all" means all the packages in tidymicrobiome.
from: github, gitlab or tidymicrobiome.org
fastgit: if install packages using fastgit. see https://hub.fastgit.org/